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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG000236

Entrez Gene ID

328

Official Gene Symbol

APEX1

Synonyms

APE|APE1|APEN|APEX|APX|HAP1|REF1

Gene name

APEX nuclease (multifunctional DNA repair enzyme) 1

Gene Type

protein-coding

Chromosome

14

Genomics Location

14q11.2

Known cancer genes

Yes

Protein products

DNA-(apurinic or apyrimidinic site) lyase

APEX nuclease (Multifunctional DNA repair enzyme) 1

Related liver disease name

Hepatocellular carcinoma

Intrahepatic cholangiocarcinoma

Database cross reference

HGNC:587
MIM:107748
Ensembl:ENSG00000100823
HPRD:00136
RefSeq Genomic nucleotide accession:AC_000057
RefSeq Genomic nucleotide gi:89161192

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0003677

DNA binding

GO:0003684

damaged DNA binding

GO:0003713

transcription coactivator activity

GO:0003714

transcription corepressor activity

GO:0003723

RNA binding

GO:0003906

DNA-(apurinic or apyrimidinic site) lyase activity

GO:0004519

endonuclease activity

GO:0004520

endodeoxyribonuclease activity

GO:0004523

ribonuclease H activity

GO:0004528

phosphodiesterase I activity

GO:0004844

uracil DNA N-glycosylase activity

GO:0005515

protein binding

GO:0005622

intracellular

GO:0005634

nucleus

GO:0005654

nucleoplasm

GO:0005730

nucleolus

GO:0005737

cytoplasm

GO:0005739

mitochondrion

GO:0005783

endoplasmic reticulum

GO:0005813

centrosome

GO:0005840

ribosome

GO:0006281

DNA repair

GO:0006284

base-excision repair

GO:0006310

DNA recombination

GO:0006355

regulation of transcription, DNA-dependent

GO:0008081

phosphoric diester hydrolase activity

GO:0008408

3'-5' exonuclease activity

GO:0016491

oxidoreductase activity

GO:0016607

nuclear speck

GO:0016787

hydrolase activity

GO:0016829

lyase activity

GO:0016890

site-specific endodeoxyribonuclease activity, specific for altered base

GO:0031490

chromatin DNA binding

GO:0043488

regulation of mRNA stability

GO:0045454

cell redox homeostasis

GO:0045739

positive regulation of DNA repair

GO:0045768

positive regulation of anti-apoptosis

GO:0046872

metal ion binding

GO:0048471

perinuclear region of cytoplasm

GO:0055114

oxidation-reduction process