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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG000246

Entrez Gene ID

338

Official Gene Symbol

APOB

Synonyms

FLDB|LDLCQ4

Gene name

apolipoprotein B (including Ag(x) antigen)

Gene Type

protein-coding

Chromosome

2

Genomics Location

2p24-p23

Known cancer genes

Yes

Protein products

Apolipoprotein B-100

Apolipoprotein B (Including Ag(X) antigen)

Apolipoprotein B

Apolipoprotein B variant

APOB protein

Related liver disease name

Hepatitis

Viral hepatitis

Hepatitis A

Hepatitis B

Hepatitis C

Chronic hepatitis C

Hepatitis D

Hepatitis E

Chronic hepatitis

Hepatocellular carcinoma

Intrahepatic cholangiocarcinoma

Database cross reference

HGNC:603
MIM:107730
Ensembl:ENSG00000084674
HPRD:00133
RefSeq Genomic nucleotide accession:AC_000045
RefSeq Genomic nucleotide gi:89161198

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO HCC.net

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0001701

in utero embryonic development

GO:0005319

lipid transporter activity

GO:0005543

phospholipid binding

GO:0005576

extracellular region

GO:0005615

extracellular space

GO:0005783

endoplasmic reticulum

GO:0005788

endoplasmic reticulum lumen

GO:0005789

endoplasmic reticulum membrane

GO:0005792

microsome

GO:0005886

plasma membrane

GO:0006629

lipid metabolic process

GO:0006642

triglyceride mobilization

GO:0006810

transport

GO:0006898

receptor-mediated endocytosis

GO:0007283

spermatogenesis

GO:0007399

nervous system development

GO:0007596

blood coagulation

GO:0008201

heparin binding

GO:0008202

steroid metabolic process

GO:0008203

cholesterol metabolic process

GO:0009566

fertilization

GO:0009615

response to virus

GO:0009743

response to carbohydrate stimulus

GO:0009791

post-embryonic development

GO:0010008

endosome membrane

GO:0010269

response to selenium ion

GO:0010744

positive regulation of macrophage derived foam cell differentiation

GO:0010884

positive regulation of lipid storage

GO:0010886

positive regulation of cholesterol storage

GO:0012506

vesicle membrane

GO:0016042

lipid catabolic process

GO:0017127

cholesterol transporter activity

GO:0019433

triglyceride catabolic process

GO:0019899

enzyme binding

GO:0030168

platelet activation

GO:0030301

cholesterol transport

GO:0030317

sperm motility

GO:0030669

clathrin-coated endocytic vesicle membrane

GO:0031904

endosome lumen

GO:0031983

vesicle lumen

GO:0032496

response to lipopolysaccharide

GO:0034359

mature chylomicron

GO:0034360

chylomicron remnant

GO:0034361

very-low-density lipoprotein particle

GO:0034362

low-density lipoprotein particle

GO:0034363

intermediate-density lipoprotein particle

GO:0034374

low-density lipoprotein particle remodeling

GO:0034379

very-low-density lipoprotein particle assembly

GO:0034383

low-density lipoprotein particle clearance

GO:0042157

lipoprotein metabolic process

GO:0042158

lipoprotein biosynthetic process

GO:0042159

lipoprotein catabolic process

GO:0042627

chylomicron

GO:0042632

cholesterol homeostasis

GO:0042953

lipoprotein transport

GO:0045540

regulation of cholesterol biosynthetic process

GO:0046982

protein heterodimerization activity

GO:0048844

artery morphogenesis

GO:0050750

low-density lipoprotein particle receptor binding

GO:0050900

leukocyte migration

GO:0071356

cellular response to tumor necrosis factor

GO:0071379

cellular response to prostaglandin stimulus