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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG000254

Entrez Gene ID

348

Official Gene Symbol

APOE

Synonyms

AD2|LDLCQ5|LPG|MGC1571

Gene name

apolipoprotein E

Gene Type

protein-coding

Chromosome

19

Genomics Location

19q13.2

Known cancer genes

Yes

Protein products

Apolipoprotein E

Apolipoprotein E

Related liver disease name

Hepatitis

Liver fibrosis and liver cirrhosis

Viral hepatitis

Hepatitis A

Hepatitis B

Chronic hepatitis B

Hepatitis C

Chronic hepatitis C

Hepatitis D

Hepatitis E

Chronic hepatitis

Alcoholic liver cirrhosis

Biliary cirrhosis

Hepatocellular carcinoma

Liver fibrosis and liver cirrhosis caused by hepatitis C infection

Intrahepatic cholangiocarcinoma

Database cross reference

HGNC:613
MIM:107741
Ensembl:ENSG00000130203
HPRD:00135
RefSeq Genomic nucleotide accession:AC_000062
RefSeq Genomic nucleotide gi:89161197

Liver relevance

Liver sepcificity

Yes/No

Yes

Evidence

Translational level from literatures

Quality score

HCC significant genes

Yes/No

Yes

Evidence

EHCO HCC.net OncoDB

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0000302

response to reactive oxygen species

GO:0001540

beta-amyloid binding

GO:0001937

negative regulation of endothelial cell proliferation

GO:0002021

response to dietary excess

GO:0005319

lipid transporter activity

GO:0005515

protein binding

GO:0005543

phospholipid binding

GO:0005576

extracellular region

GO:0005615

extracellular space

GO:0005737

cytoplasm

GO:0005769

early endosome

GO:0005770

late endosome

GO:0005794

Golgi apparatus

GO:0005874

microtubule

GO:0005886

plasma membrane

GO:0006629

lipid metabolic process

GO:0006641

triglyceride metabolic process

GO:0006707

cholesterol catabolic process

GO:0006874

cellular calcium ion homeostasis

GO:0006898

receptor-mediated endocytosis

GO:0006916

anti-apoptosis

GO:0006917

induction of apoptosis

GO:0007010

cytoskeleton organization

GO:0007186

G-protein coupled receptor protein signaling pathway

GO:0007263

nitric oxide mediated signal transduction

GO:0007271

synaptic transmission, cholinergic

GO:0007568

aging

GO:0008201

heparin binding

GO:0008203

cholesterol metabolic process

GO:0008219

cell death

GO:0008289

lipid binding

GO:0010468

regulation of gene expression

GO:0010544

negative regulation of platelet activation

GO:0010873

positive regulation of cholesterol esterification

GO:0010875

positive regulation of cholesterol efflux

GO:0014012

peripheral nervous system axon regeneration

GO:0016209

antioxidant activity

GO:0017127

cholesterol transporter activity

GO:0019934

cGMP-mediated signaling

GO:0030195

negative regulation of blood coagulation

GO:0030425

dendrite

GO:0030516

regulation of axon extension

GO:0030828

positive regulation of cGMP biosynthetic process

GO:0031232

extrinsic to external side of plasma membrane

GO:0032488

Cdc42 protein signal transduction

GO:0032805

positive regulation of low-density lipoprotein particle receptor catabolic process

GO:0033344

cholesterol efflux

GO:0033700

phospholipid efflux

GO:0034361

very-low-density lipoprotein particle

GO:0034362

low-density lipoprotein particle

GO:0034363

intermediate-density lipoprotein particle

GO:0034364

high-density lipoprotein particle

GO:0034372

very-low-density lipoprotein particle remodeling

GO:0034374

low-density lipoprotein particle remodeling

GO:0034375

high-density lipoprotein particle remodeling

GO:0034380

high-density lipoprotein particle assembly

GO:0034382

chylomicron remnant clearance

GO:0034384

high-density lipoprotein particle clearance

GO:0034447

very-low-density lipoprotein particle clearance

GO:0042157

lipoprotein metabolic process

GO:0042158

lipoprotein biosynthetic process

GO:0042159

lipoprotein catabolic process

GO:0042311

vasodilation

GO:0042627

chylomicron

GO:0042632

cholesterol homeostasis

GO:0042802

identical protein binding

GO:0042803

protein homodimerization activity

GO:0043025

neuronal cell body

GO:0043407

negative regulation of MAP kinase activity

GO:0043537

negative regulation of blood vessel endothelial cell migration

GO:0043691

reverse cholesterol transport

GO:0045471

response to ethanol

GO:0045541

negative regulation of cholesterol biosynthetic process

GO:0046907

intracellular transport

GO:0046911

metal chelating activity

GO:0046982

protein heterodimerization activity

GO:0048156

tau protein binding

GO:0048168

regulation of neuronal synaptic plasticity

GO:0048844

artery morphogenesis

GO:0050728

negative regulation of inflammatory response

GO:0050750

low-density lipoprotein particle receptor binding

GO:0051000

positive regulation of nitric-oxide synthase activity

GO:0051044

positive regulation of membrane protein ectodomain proteolysis

GO:0051651

maintenance of location in cell

GO:0055088

lipid homeostasis

GO:0060228

phosphatidylcholine-sterol O-acyltransferase activator activity

GO:0070326

very-low-density lipoprotein particle receptor binding

GO:0071363

cellular response to growth factor stimulus

GO:0071813

lipoprotein particle binding