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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG000900

Entrez Gene ID

1281

Official Gene Symbol

COL3A1

Synonyms

EDS4A|FLJ34534

Gene name

collagen, type III, alpha 1

Gene Type

protein-coding

Chromosome

2

Genomics Location

2q31

Known cancer genes

Yes

Protein products

Collagen alpha-1(III) chain

Collagen, type III, alpha 1

Related liver disease name

Hepatitis

Liver fibrosis and liver cirrhosis

Viral hepatitis

Hepatitis A

Hepatitis B

Chronic hepatitis B

Hepatitis C

Hepatitis D

Hepatitis E

Chronic hepatitis

Hepatocellular carcinoma

Liver fibrosis and liver cirrhosis caused by hepatitis B infection

Database cross reference

HGNC:2201
MIM:120180
Ensembl:ENSG00000168542
HPRD:00365
RefSeq Genomic nucleotide accession:AC_000045
RefSeq Genomic nucleotide gi:89161198

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

HCC.net

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0001501

skeletal system development

GO:0001568

blood vessel development

GO:0005178

integrin binding

GO:0005201

extracellular matrix structural constituent

GO:0005515

protein binding

GO:0005576

extracellular region

GO:0005581

collagen

GO:0005586

collagen type III

GO:0005615

extracellular space

GO:0007160

cell-matrix adhesion

GO:0007179

transforming growth factor beta receptor signaling pathway

GO:0007229

integrin-mediated signaling pathway

GO:0007411

axon guidance

GO:0007507

heart development

GO:0009314

response to radiation

GO:0018149

peptide cross-linking

GO:0030168

platelet activation

GO:0030199

collagen fibril organization

GO:0031012

extracellular matrix

GO:0032964

collagen biosynthetic process

GO:0034097

response to cytokine stimulus

GO:0042060

wound healing

GO:0043206

fibril organization

GO:0043588

skin development

GO:0046332

SMAD binding

GO:0048407

platelet-derived growth factor binding

GO:0048565

digestive tract development

GO:0050777

negative regulation of immune response