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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG001253

Entrez Gene ID

1789

Official Gene Symbol

DNMT3B

Synonyms

ICF|M.HsaIIIB

Gene name

DNA (cytosine-5-)-methyltransferase 3 beta

Gene Type

protein-coding

Chromosome

20

Genomics Location

20q11.2

Known cancer genes

Yes

Protein products

DNA (cytosine-5)-methyltransferase 3B

Related liver disease name

Liver fibrosis and liver cirrhosis

Chronic hepatitis

Hepatocellular carcinoma

Database cross reference

HGNC:2979
MIM:602900
Ensembl:ENSG00000088305
HPRD:04209
RefSeq Genomic nucleotide accession:AC_000063
RefSeq Genomic nucleotide gi:89161200

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

HCC.net OncoDB

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0003677

DNA binding

GO:0003714

transcription corepressor activity

GO:0003886

DNA (cytosine-5-)-methyltransferase activity

GO:0005515

protein binding

GO:0005634

nucleus

GO:0005720

nuclear heterochromatin

GO:0005730

nucleolus

GO:0005737

cytoplasm

GO:0006306

DNA methylation

GO:0006346

methylation-dependent chromatin silencing

GO:0006349

regulation of gene expression by genetic imprinting

GO:0009008

DNA-methyltransferase activity

GO:0010212

response to ionizing radiation

GO:0010424

DNA methylation on cytosine within a CG sequence

GO:0010628

positive regulation of gene expression

GO:0016740

transferase activity

GO:0031503

protein complex localization

GO:0042493

response to drug

GO:0043231

intracellular membrane-bounded organelle

GO:0045322

unmethylated CpG binding

GO:0045666

positive regulation of neuron differentiation

GO:0046498

S-adenosylhomocysteine metabolic process

GO:0046499

S-adenosylmethioninamine metabolic process

GO:0046872

metal ion binding

GO:0051571

positive regulation of histone H3-K4 methylation

GO:0051573

negative regulation of histone H3-K9 methylation

GO:0051718

DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates

GO:0090116

C-5 methylation of cytosine