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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG002089

Entrez Gene ID

3065

Official Gene Symbol

HDAC1

Synonyms

DKFZp686H12203|GONN10|HD1|RPD3|RPD3L1

Gene name

histone deacetylase 1

Gene Type

protein-coding

Chromosome

1

Genomics Location

1p34

Known cancer genes

Yes

Protein products

Histone deacetylase

Histone deacetylase 1

Putative uncharacterized protein DKFZp686H12203

Histone deacetylase 1

Histone deacetylase

Related liver disease name

Hepatitis B

Hepatocellular carcinoma

Database cross reference

HGNC:4852
MIM:601241
Ensembl:ENSG00000116478
HPRD:03143
RefSeq Genomic nucleotide accession:AC_000044
RefSeq Genomic nucleotide gi:89161184

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO HCC.net

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0000118

histone deacetylase complex

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

GO:0001106

RNA polymerase II transcription corepressor activity

GO:0003700

sequence-specific DNA binding transcription factor activity

GO:0004407

histone deacetylase activity

GO:0005515

protein binding

GO:0005634

nucleus

GO:0005654

nucleoplasm

GO:0005730

nucleolus

GO:0005737

cytoplasm

GO:0005829

cytosol

GO:0006338

chromatin remodeling

GO:0006351

transcription, DNA-dependent

GO:0006355

regulation of transcription, DNA-dependent

GO:0006476

protein deacetylation

GO:0006916

anti-apoptosis

GO:0007596

blood coagulation

GO:0008134

transcription factor binding

GO:0008284

positive regulation of cell proliferation

GO:0009913

epidermal cell differentiation

GO:0010832

negative regulation of myotube differentiation

GO:0010870

positive regulation of receptor biosynthetic process

GO:0016568

chromatin modification

GO:0016575

histone deacetylation

GO:0016580

Sin3 complex

GO:0016581

NuRD complex

GO:0016787

hydrolase activity

GO:0019899

enzyme binding

GO:0032041

NAD-dependent histone deacetylase activity (H3-K14 specific)

GO:0033558

protein deacetylase activity

GO:0033613

activating transcription factor binding

GO:0034739

histone deacetylase activity (H3-K16 specific)

GO:0042475

odontogenesis of dentine-containing tooth

GO:0042733

embryonic digit morphogenesis

GO:0042802

identical protein binding

GO:0042826

histone deacetylase binding

GO:0043066

negative regulation of apoptosis

GO:0043922

negative regulation by host of viral transcription

GO:0044419

interspecies interaction between organisms

GO:0045786

negative regulation of cell cycle

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

GO:0046969

NAD-dependent histone deacetylase activity (H3-K9 specific)

GO:0046970

NAD-dependent histone deacetylase activity (H4-K16 specific)

GO:0048011

nerve growth factor receptor signaling pathway

GO:0060766

negative regulation of androgen receptor signaling pathway

GO:0060789

hair follicle placode formation

GO:0061029

eyelid development in camera-type eye

GO:0061198

fungiform papilla formation

GO:0070932

histone H3 deacetylation

GO:0070933

histone H4 deacetylation