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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG002155

Entrez Gene ID

3158

Official Gene Symbol

HMGCS2

Gene name

3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)

Gene Type

protein-coding

Chromosome

1

Genomics Location

1p13-p12

Known cancer genes

Yes

Protein products

cDNA FLJ56838, highly similar to Hydroxymethylglutaryl-CoA synthase, mitochondrial (EC 2.3.3.10)

Hydroxymethylglutaryl-CoA synthase, mitochondrial

HMGCS2 protein

Related liver disease name

Hepatocellular carcinoma

Database cross reference

HGNC:5008
MIM:600234
Ensembl:ENSG00000134240
HPRD:02580
RefSeq Genomic nucleotide accession:AC_000044
RefSeq Genomic nucleotide gi:89161184

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO HCC.net OncoDB

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0001822

kidney development

GO:0001889

liver development

GO:0004421

hydroxymethylglutaryl-CoA synthase activity

GO:0005739

mitochondrion

GO:0005759

mitochondrial matrix

GO:0006695

cholesterol biosynthetic process

GO:0007420

brain development

GO:0007494

midgut development

GO:0007584

response to nutrient

GO:0008299

isoprenoid biosynthetic process

GO:0009266

response to temperature stimulus

GO:0009617

response to bacterium

GO:0010038

response to metal ion

GO:0016740

transferase activity

GO:0030324

lung development

GO:0032869

cellular response to insulin stimulus

GO:0032870

cellular response to hormone stimulus

GO:0033555

multicellular organismal response to stress

GO:0033574

response to testosterone stimulus

GO:0033762

response to glucagon stimulus

GO:0034014

response to triglyceride

GO:0034284

response to monosaccharide stimulus

GO:0034696

response to prostaglandin F stimulus

GO:0042493

response to drug

GO:0042594

response to starvation

GO:0043441

acetoacetic acid biosynthetic process

GO:0044255

cellular lipid metabolic process

GO:0045471

response to ethanol

GO:0046950

cellular ketone body metabolic process

GO:0046951

ketone body biosynthetic process

GO:0051591

response to cAMP

GO:0060416

response to growth hormone stimulus

GO:0060612

adipose tissue development

GO:0070543

response to linoleic acid

GO:0071222

cellular response to lipopolysaccharide

GO:0071230

cellular response to amino acid stimulus

GO:0071385

cellular response to glucocorticoid stimulus

GO:0071398

cellular response to fatty acid

GO:0071407

cellular response to organic cyclic compound

GO:0071445

cellular response to protein stimulus