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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG002676

Entrez Gene ID

3949

Official Gene Symbol

LDLR

Synonyms

FH|FHC|LDLCQ2

Gene name

low density lipoprotein receptor

Gene Type

protein-coding

Chromosome

19

Genomics Location

19p13.3

Known cancer genes

Yes

Protein products

cDNA FLJ54620, highly similar to Low-density lipoprotein receptor

cDNA FLJ50552, highly similar to Low-density lipoprotein receptor

cDNA FLJ50622, highly similar to Low-density lipoprotein receptor

cDNA FLJ50672, highly similar to Low-density lipoprotein receptor

Low-density lipoprotein receptor

Low density lipoprotein receptor variant

Low density lipoprotein receptor

Related liver disease name

Hepatitis

Liver fibrosis and liver cirrhosis

Viral hepatitis

Hepatitis A

Hepatitis B

Hepatitis C

Chronic hepatitis C

Hepatitis D

Hepatitis E

Chronic hepatitis

Hepatocellular carcinoma

Liver fibrosis and liver cirrhosis caused by hepatitis C infection

Database cross reference

HGNC:6547
MIM:606945
Ensembl:ENSG00000130164
HPRD:06091
RefSeq Genomic nucleotide accession:AC_000062
RefSeq Genomic nucleotide gi:89161197

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO HCC.net

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0004872

receptor activity

GO:0005041

low-density lipoprotein receptor activity

GO:0005509

calcium ion binding

GO:0005515

protein binding

GO:0005764

lysosome

GO:0005769

early endosome

GO:0005886

plasma membrane

GO:0005887

integral to plasma membrane

GO:0005901

caveola

GO:0005905

coated pit

GO:0006629

lipid metabolic process

GO:0006810

transport

GO:0006869

lipid transport

GO:0006897

endocytosis

GO:0006898

receptor-mediated endocytosis

GO:0007568

aging

GO:0008202

steroid metabolic process

GO:0008203

cholesterol metabolic process

GO:0009725

response to hormone stimulus

GO:0009897

external side of plasma membrane

GO:0010008

endosome membrane

GO:0030229

very-low-density lipoprotein particle receptor activity

GO:0030299

intestinal cholesterol absorption

GO:0030301

cholesterol transport

GO:0030669

clathrin-coated endocytic vesicle membrane

GO:0032355

response to estradiol stimulus

GO:0033762

response to glucagon stimulus

GO:0034362

low-density lipoprotein particle

GO:0034383

low-density lipoprotein particle clearance

GO:0042157

lipoprotein metabolic process

GO:0042159

lipoprotein catabolic process

GO:0042632

cholesterol homeostasis

GO:0044419

interspecies interaction between organisms