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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG002776

Entrez Gene ID

4089

Official Gene Symbol

SMAD4

Synonyms

DPC4|JIP|MADH4

Gene name

SMAD family member 4

Gene Type

protein-coding

Chromosome

18

Genomics Location

18q21.1

Known cancer genes

Yes

Protein products

Mothers against decapentaplegic homolog 4

Related liver disease name

Liver fibrosis and liver cirrhosis

Hepatocellular carcinoma

Intrahepatic cholangiocarcinoma

Database cross reference

HGNC:6770
MIM:600993
Ensembl:ENSG00000141646
HPRD:02995
RefSeq Genomic nucleotide accession:AC_000061
RefSeq Genomic nucleotide gi:89161196

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO HCC.net OncoDB

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0001658

branching involved in ureteric bud morphogenesis

GO:0001666

response to hypoxia

GO:0001701

in utero embryonic development

GO:0001702

gastrulation with mouth forming second

GO:0001822

kidney development

GO:0003677

DNA binding

GO:0003682

chromatin binding

GO:0003700

sequence-specific DNA binding transcription factor activity

GO:0005515

protein binding

GO:0005518

collagen binding

GO:0005622

intracellular

GO:0005634

nucleus

GO:0005654

nucleoplasm

GO:0005667

transcription factor complex

GO:0005730

nucleolus

GO:0005737

cytoplasm

GO:0005813

centrosome

GO:0005829

cytosol

GO:0006351

transcription, DNA-dependent

GO:0007179

transforming growth factor beta receptor signaling pathway

GO:0007183

SMAD protein complex assembly

GO:0007492

endoderm development

GO:0007498

mesoderm development

GO:0008285

negative regulation of cell proliferation

GO:0009952

anterior/posterior pattern formation

GO:0010718

positive regulation of epithelial to mesenchymal transition

GO:0010862

positive regulation of pathway-restricted SMAD protein phosphorylation

GO:0017015

regulation of transforming growth factor beta receptor signaling pathway

GO:0030308

negative regulation of cell growth

GO:0030509

BMP signaling pathway

GO:0030511

positive regulation of transforming growth factor beta receptor signaling pathway

GO:0030616

transforming growth factor beta receptor, common-partner cytoplasmic mediator activity

GO:0032444

activin responsive factor complex

GO:0032525

somite rostral/caudal axis specification

GO:0032909

regulation of transforming growth factor-beta2 production

GO:0042177

negative regulation of protein catabolic process

GO:0042802

identical protein binding

GO:0042803

protein homodimerization activity

GO:0043565

sequence-specific DNA binding

GO:0045892

negative regulation of transcription, DNA-dependent

GO:0045893

positive regulation of transcription, DNA-dependent

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

GO:0048589

developmental growth

GO:0048663

neuron fate commitment

GO:0048729

tissue morphogenesis

GO:0048859

formation of anatomical boundary

GO:0051098

regulation of binding

GO:0060021

palate development

GO:0060391

positive regulation of SMAD protein import into nucleus

GO:0060395

SMAD protein signal transduction

GO:0060548

negative regulation of cell death

GO:0070411

I-SMAD binding

GO:0070412

R-SMAD binding

GO:0071559

response to transforming growth factor beta stimulus

GO:0072133

metanephric mesenchyme morphogenesis

GO:0072134

nephrogenic mesenchyme morphogenesis