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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG003263

Entrez Gene ID

4904

Official Gene Symbol

YBX1

Synonyms

BPN8|CSDA2|CSDB|DBPB|MDRNNF1|MGC104858|MGC110976|MGC117250|NSEPN1|NSEP1|YBN1|YB1

Gene name

Y box binding protein 1

Gene Type

protein-coding

Chromosome

1

Genomics Location

1p34

Known cancer genes

Yes

Protein products

YBX1 protein

Uncharacterized protein

YBX1 protein

YBX1 protein

Nuclease-sensitive element-binding protein 1

Related liver disease name

Hepatocellular carcinoma

Database cross reference

HGNC:8014
MIM:154030
Ensembl:ENSG00000065978
HPRD:01095
RefSeq Genomic nucleotide accession:AC_000044
RefSeq Genomic nucleotide gi:89161184

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO OncoDB

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0000398

nuclear mRNA splicing, via spliceosome

GO:0001701

in utero embryonic development

GO:0003677

DNA binding

GO:0003690

double-stranded DNA binding

GO:0003697

single-stranded DNA binding

GO:0003700

sequence-specific DNA binding transcription factor activity

GO:0003723

RNA binding

GO:0005515

protein binding

GO:0005576

extracellular region

GO:0005634

nucleus

GO:0005654

nucleoplasm

GO:0005689

U12-type spliceosomal complex

GO:0005737

cytoplasm

GO:0006355

regulation of transcription, DNA-dependent

GO:0006366

transcription from RNA polymerase II promoter

GO:0008380

RNA splicing

GO:0010467

gene expression

GO:0010494

stress granule

GO:0030529

ribonucleoprotein complex

GO:0051781

positive regulation of cell division

GO:0070934

CRD-mediated mRNA stabilization

GO:0070937

CRD-mediated mRNA stability complex

GO:0071204

histone pre-mRNA 3'end processing complex