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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG004265

Entrez Gene ID

6310

Official Gene Symbol

ATXN1

Synonyms

ATX1|D6S504E|SCA1

Gene name

ataxin 1

Gene Type

protein-coding

Chromosome

6

Genomics Location

6p23

Known cancer genes

Yes

Protein products

Ataxin-1

ATXN1 protein

ATXN1 protein

Related liver disease name

Hepatocellular carcinoma

Database cross reference

HGNC:10548
MIM:601556
Ensembl:ENSG00000124788
HPRD:03333
RefSeq Genomic nucleotide accession:AC_000049
RefSeq Genomic nucleotide gi:89161209

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

HCC.net

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0003723

RNA binding

GO:0005515

protein binding

GO:0005634

nucleus

GO:0005654

nucleoplasm

GO:0005730

nucleolus

GO:0005737

cytoplasm

GO:0006396

RNA processing

GO:0008022

protein C-terminus binding

GO:0008219

cell death

GO:0008266

poly(U) RNA binding

GO:0008344

adult locomotory behavior

GO:0008542

visual learning

GO:0016363

nuclear matrix

GO:0034046

poly(G) RNA binding

GO:0042272

nuclear RNA export factor complex

GO:0042326

negative regulation of phosphorylation

GO:0042405

nuclear inclusion body

GO:0042802

identical protein binding

GO:0043231

intracellular membrane-bounded organelle

GO:0043569

negative regulation of insulin-like growth factor receptor signaling pathway

GO:0043621

protein self-association

GO:0045892

negative regulation of transcription, DNA-dependent

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

GO:0051168

nuclear export

GO:0060079

regulation of excitatory postsynaptic membrane potential