Choose one of the five choices you want to search:

Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG004320

Entrez Gene ID

6382

Official Gene Symbol

SDC1

Synonyms

CD138|SDC|SYND1|syndecan

Gene name

syndecan 1

Gene Type

protein-coding

Chromosome

2

Genomics Location

2p24.1

Known cancer genes

Yes

Protein products

Syndecan-1

Related liver disease name

Hepatocellular carcinoma

Intrahepatic cholangiocarcinoma

Database cross reference

HGNC:10658
MIM:186355
Ensembl:ENSG00000115884
HPRD:01718
RefSeq Genomic nucleotide accession:AC_000045
RefSeq Genomic nucleotide gi:89161198

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0001657

ureteric bud development

GO:0001931

uropod

GO:0001948

glycoprotein binding

GO:0005737

cytoplasm

GO:0005886

plasma membrane

GO:0005887

integral to plasma membrane

GO:0005925

focal adhesion

GO:0006629

lipid metabolic process

GO:0008022

protein C-terminus binding

GO:0008092

cytoskeletal protein binding

GO:0009636

response to toxin

GO:0009986

cell surface

GO:0042060

wound healing

GO:0042157

lipoprotein metabolic process

GO:0042476

odontogenesis

GO:0042542

response to hydrogen peroxide

GO:0043234

protein complex

GO:0048627

myoblast development

GO:0051384

response to glucocorticoid stimulus

GO:0051591

response to cAMP

GO:0051592

response to calcium ion

GO:0055002

striated muscle cell development

GO:0060009

Sertoli cell development

GO:0060070

canonical Wnt receptor signaling pathway