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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG004445

Entrez Gene ID

6539

Official Gene Symbol

SLC6A12

Synonyms

BGTN1|BGT1|FLJ38727|GAT2

Gene name

solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12

Gene Type

protein-coding

Chromosome

12

Genomics Location

12p13

Known cancer genes

Yes

Protein products

Transporter

Sodium- and chloride-dependent betaine transporter

Related liver disease name

Hepatocellular carcinoma

Database cross reference

HGNC:11045
MIM:603080
Ensembl:ENSG00000111181
HPRD:04358
RefSeq Genomic nucleotide accession:AC_000055
RefSeq Genomic nucleotide gi:89161189

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0003333

amino acid transmembrane transport

GO:0005328

neurotransmitter:sodium symporter activity

GO:0005332

gamma-aminobutyric acid:sodium symporter activity

GO:0005886

plasma membrane

GO:0005887

integral to plasma membrane

GO:0006810

transport

GO:0006811

ion transport

GO:0006865

amino acid transport

GO:0007268

synaptic transmission

GO:0007269

neurotransmitter secretion

GO:0009992

cellular water homeostasis

GO:0010033

response to organic substance

GO:0015171

amino acid transmembrane transporter activity

GO:0015293

symporter activity

GO:0016021

integral to membrane

GO:0034641

cellular nitrogen compound metabolic process

GO:0055085

transmembrane transport

GO:0071474

cellular hyperosmotic response