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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG004492

Entrez Gene ID

6595

Official Gene Symbol

SMARCA2

Synonyms

BAF190|BRM|FLJ36757|MGC74511|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a

Gene name

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2

Gene Type

protein-coding

Chromosome

9

Genomics Location

9p22.3

Known cancer genes

Yes

Protein products

SMARCA2 protein

cDNA FLJ36757 fis, clone UTERU2018522, highly similar to Human transcriptional activator hSNF2a

Probable global transcription activator SNF2L2

Related liver disease name

Hepatocellular carcinoma

Database cross reference

HGNC:11098
MIM:600014
Ensembl:ENSG00000080503
HPRD:02483
RefSeq Genomic nucleotide accession:AC_000052
RefSeq Genomic nucleotide gi:89161215

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0000122

negative regulation of transcription from RNA polymerase II promoter

GO:0000166

nucleotide binding

GO:0000790

nuclear chromatin

GO:0003677

DNA binding

GO:0003713

transcription coactivator activity

GO:0004386

helicase activity

GO:0005515

protein binding

GO:0005524

ATP binding

GO:0005634

nucleus

GO:0005654

nucleoplasm

GO:0005730

nucleolus

GO:0006338

chromatin remodeling

GO:0006355

regulation of transcription, DNA-dependent

GO:0006357

regulation of transcription from RNA polymerase II promoter

GO:0007399

nervous system development

GO:0008094

DNA-dependent ATPase activity

GO:0008285

negative regulation of cell proliferation

GO:0016514

SWI/SNF complex

GO:0016818

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

GO:0030308

negative regulation of cell growth

GO:0043231

intracellular membrane-bounded organelle

GO:0045111

intermediate filament cytoskeleton

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

GO:0071564

npBAF complex

GO:0071565

nBAF complex

GO:0071778

WINAC complex