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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG004496

Entrez Gene ID

6599

Official Gene Symbol

SMARCC1

Synonyms

BAF155|CRACC1|Rsc8|SRG3|SWI3

Gene name

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1

Gene Type

protein-coding

Chromosome

3

Genomics Location

3p21.31

Known cancer genes

Yes

Protein products

SMARCC1 protein

SMARCC1 protein

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1

SWI/SNF complex subunit SMARCC1

Related liver disease name

Hepatocellular carcinoma

Database cross reference

HGNC:11104
MIM:601732
Ensembl:ENSG00000173473
HPRD:03435
RefSeq Genomic nucleotide accession:AC_000046
RefSeq Genomic nucleotide gi:89161204

Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

EHCO

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0001741

XY body

GO:0003677

DNA binding

GO:0003682

chromatin binding

GO:0003713

transcription coactivator activity

GO:0005515

protein binding

GO:0005622

intracellular

GO:0005625

soluble fraction

GO:0005634

nucleus

GO:0005654

nucleoplasm

GO:0005730

nucleolus

GO:0006338

chromatin remodeling

GO:0006357

regulation of transcription from RNA polymerase II promoter

GO:0007399

nervous system development

GO:0008286

insulin receptor signaling pathway

GO:0009887

organ morphogenesis

GO:0016514

SWI/SNF complex

GO:0045893

positive regulation of transcription, DNA-dependent

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

GO:0047485

protein N-terminus binding

GO:0071564

npBAF complex

GO:0071565

nBAF complex

GO:0071778

WINAC complex