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Gene, Transcriptome, Protein, Pathway or Disease. 

Gene basic information

LiverAtlas Gene ID

HuLG010643

Entrez Gene ID

55275

Official Gene Symbol

VPS53

Synonyms

FLJ10979|FLJ41112|FLJ61757|HCCS1|MGC39512|hVps53L|pp13624

Gene name

vacuolar protein sorting 53 homolog (S. cerevisiae)

Gene Type

protein-coding

Chromosome

17

Genomics Location

17p13.3

Known cancer genes

Yes

Protein products

Gastric cancer hepatocellular carcinoma suppressor 1 variant

Vps53 long isoform

cDNA FLJ35213 fis, clone PROST1000215, highly similar to Vacuolar protein sorting protein 53

Vacuolar protein sorting-associated protein 53 homolog

Related liver disease name

Hepatocellular carcinoma

Database cross reference

HGNC:25608
Ensembl:ENSG00000141252
HPRD:07720
RefSeq Genomic nucleotide accession:AC_000060
RefSeq Genomic nucleotide gi:89161195


Liver relevance

HCC significant genes

Yes/No

Yes

Evidence

OncoDB

Quality score

 

Ontology annotation

GO ID

GO annotation

GO:0005768

endosome

GO:0005794

Golgi apparatus

GO:0010008

endosome membrane

GO:0015031

protein transport

GO:0016020

membrane