Protein basic information
LiverAtlas Protein ID |
HuLPr00052 |
Uniprot ID |
|
Uniprot Acc |
P04229;A4F5N0;A8K098;O62869;P13758;Q06662;Q30116;Q30117;Q5Y7E9;Q7M2H4;Q95461;Q9BCL7;Q9GIK5;Q9MXZ0;Q9MXZ5;Q9TQ91; |
Protein name |
HLA class II histocompatibility antigen, DRB1-1 beta chain |
Comment |
FUNCTION:Binds peptides derived from antigens that access the endocytic route of antigen presenting cells (APC) and presents them on the cell surface for recognition by the CD4 T-cells. The peptide binding cleft accomodates peptides of 10-30 residues. The peptides presented by MHC class II molecules are generated mostly by degradation of proteins that access the endocytic route; where they are processed by lysosomal proteases and other hydrolases. Exogenous antigens that have been endocytosed by the APC are thus readily available for presentation via MHC II molecules; and for this reason this antigen presentation pathway is usually referred to as exogenous. As membrane proteins on their way to degradation in lysosomes as part of their normal turn-over are also contained in the endosomal/lysosomal compartments; exogenous antigens must compete with those derived from endogenous components. Autophagy is also a source of endogenous peptides; autophagosomes constitutively fuse with MHC clas |
Subcellular localization |
Cell membrane;Single-pass type I membrane protein.Endoplasmic reticulum membrane;Single-pass type I membrane protein.Golgi apparatus, trans-Golgi network membrane;Single-pass type I membrane protein.Endosome membrane;Single- pass type I membrane protein.Lysosome membrane;Single-pass type I membrane protein.Late endosome membrane;Single-pass type I membrane protein. |
Gene name |
|
Protein sequence
|
MVCLKLPGGSCMTALTVTLMVLSSPLALAGDTRPRFLWQL KFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAV TELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESF TVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIE VRWFRNGQEEKAGVVSTGLIQNGDWTFQTLVMLETVPRS GEVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGF VLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS |
Database cross reference |
RefSeq Protein accession:NP_002115
|
Liver relevance
HLPP validation |
Yes/No |
Yes |
Project name |
Human Liver Organelles; |
Ontology annotation
GO-C |
GO:0005789;C:endoplasmic reticulum membrane;IEA:UniProtKB-SubCell. GO:0005794;C:Golgi apparatus;IEA:UniProtKB-SubCell. GO:0016021;C:integral to membrane;IEA:UniProtKB-KW. GO:0031902;C:late endosome membrane;IDA:UniProtKB. GO:0005765;C:lysosomal membran |
GO-P |
GO:0002504;P:antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;IEA:UniProtKB-KW. GO:0060333;P:interferon-gamma-mediated signaling pathway;TAS:Reactome. GO:0031295;P:T cell costimulation;TAS:Reactome. GO:0050852;P: |
Post-translational modification
LiverAtlas Protein ID |
MOD type1 |
Position1 |
Residue1 |
Source name1 |
source ID1 |
Source method |
HLPP validation1 (Yes/no) |
Quality score |
HuLPr00052 |
UBIQUITINATION |
254 |
K |
PhosphoSitePlus |
LTP |
N |
||
HuLPr00052 |
PHOSPHORYLATION |
112 |
Y |
PhosphoSitePlus |
LTP |
N |
||
HuLPr00052 |
PHOSPHORYLATION |
107 |
Y |
PhosphoSitePlus |
LTP |
N |
Pathway
Pathway name | |
Pathway name | |
Pathway name | |
Pathway name |