Protein basic information
LiverAtlas Protein ID |
HuLPr00054 |
Uniprot ID |
|
Uniprot Acc |
Q30134;O19718;O19788;Q29968;Q30108;Q30115;Q9BCP0;Q9BCP1;Q9BCP2;Q9BD33;Q9TQ37;Q9UIM9; |
Protein name |
HLA class II histocompatibility antigen, DRB1-8 beta chain |
Comment |
FUNCTION:Binds peptides derived from antigens that access the endocytic route of antigen presenting cells (APC) and presents them on the cell surface for recognition by the CD4 T-cells. The peptide binding cleft accomodates peptides of 10-30 residues. The peptides presented by MHC class II molecules are generated mostly by degradation of proteins that access the endocytic route; where they are processed by lysosomal proteases and other hydrolases. Exogenous antigens that have been endocytosed by the APC are thus readily available for presentation via MHC II molecules; and for this reason this antigen presentation pathway is usually referred to as exogenous. As membrane proteins on their way to degradation in lysosomes as part of their normal turn-over are also contained in the endosomal/lysosomal compartments; exogenous antigens must compete with those derived from endogenous components. Autophagy is also a source of endogenous peptides; autophagosomes constitutively fuse with MHC clas |
Subcellular localization |
Cell membrane;Single-pass type I membrane protein.Endoplasmic reticulum membrane;Single-pass type I membrane protein.Golgi apparatus, trans-Golgi network membrane;Single-pass type I membrane protein.Endosome membrane;Single- pass type I membrane protein.Lysosome membrane;Single-pass type I membrane protein.Late endosome membrane;Single-pass type I membrane protein. |
Gene name |
|
Protein sequence
|
MVCLRLPGGSCMAVLTVTLMVLSSPLALAGDTRPRFLEYS TGECYFFNGTERVRFLDRYFYNQEEYVRFDSDVGEYRAV TELGRPSAEYWNSQKDFLEDRRALVDTYCRHNYGVGESF TVQRRVHPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIE VRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRS GEVYTCQVEHPSVTSPLTVEWSARSESAQSKMLSGVGGF VLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS |
Database cross reference |
RefSeq Protein accession:NP_002115
|
Liver relevance
HLPP validation |
Yes/No |
Yes |
Project name |
Human Fetal Liver; |
Ontology annotation
GO-C |
GO:0005789;C:endoplasmic reticulum membrane;IEA:UniProtKB-SubCell. GO:0005794;C:Golgi apparatus;IEA:UniProtKB-SubCell. GO:0016021;C:integral to membrane;IEA:UniProtKB-KW. GO:0031902;C:late endosome membrane;IDA:UniProtKB. GO:0005765;C:lysosomal membran |
GO-P |
GO:0002504;P:antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;IEA:UniProtKB-KW. GO:0006955;P:immune response;IEA:InterPro. |